Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Shmt1P50431 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Shmt1P50431 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.08□□□□□ -0.32
Shmt1P50431 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.08□□□□□ -0.32
Shmt1P50431 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.08□□□□□ -0.32
Shmt1P50431 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Gm9996-201ENSMUST00000070359 913 ntBASIC13.08□□□□□ -0.32
Shmt1P50431 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Shmt1P50431 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Shmt1P50431 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.07□□□□□ -0.32
Shmt1P50431 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.07□□□□□ -0.32
Shmt1P50431 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.07□□□□□ -0.32
Shmt1P50431 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.07□□□□□ -0.32
Shmt1P50431 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Shmt1P50431 Gm9630-201ENSMUST00000178304 885 ntBASIC13.07□□□□□ -0.32
Shmt1P50431 Gm16505-201ENSMUST00000179981 232 ntBASIC13.07□□□□□ -0.32
Shmt1P50431 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.07□□□□□ -0.32
Shmt1P50431 Gm45186-201ENSMUST00000206874 478 ntBASIC13.07□□□□□ -0.32
Shmt1P50431 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.07□□□□□ -0.32
Shmt1P50431 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Shmt1P50431 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Shmt1P50431 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.07□□□□□ -0.32
Shmt1P50431 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.07□□□□□ -0.32
Shmt1P50431 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shmt1P50431 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Shmt1P50431 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.06□□□□□ -0.32
Shmt1P50431 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Shmt1P50431 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.06□□□□□ -0.32
Shmt1P50431 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Shmt1P50431 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.06□□□□□ -0.32
Shmt1P50431 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.06□□□□□ -0.32
Shmt1P50431 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.06□□□□□ -0.32
Shmt1P50431 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Shmt1P50431 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.06□□□□□ -0.32
Shmt1P50431 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.06□□□□□ -0.32
Shmt1P50431 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.06□□□□□ -0.32
Shmt1P50431 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.06□□□□□ -0.32
Shmt1P50431 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.06□□□□□ -0.32
Shmt1P50431 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.06□□□□□ -0.32
Shmt1P50431 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Shmt1P50431 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Shmt1P50431 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Shmt1P50431 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.06□□□□□ -0.32
Shmt1P50431 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shmt1P50431 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms