Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
GdnfP48540 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.89□□□□□ -0.67
GdnfP48540 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
GdnfP48540 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
GdnfP48540 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
GdnfP48540 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
GdnfP48540 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
GdnfP48540 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Gm13263-201ENSMUST00000121271 838 ntBASIC10.88□□□□□ -0.67
GdnfP48540 Gm11978-201ENSMUST00000122315 466 ntBASIC10.88□□□□□ -0.67
GdnfP48540 Mir1894-201ENSMUST00000122802 81 ntBASIC10.88□□□□□ -0.67
GdnfP48540 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.88□□□□□ -0.67
GdnfP48540 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
GdnfP48540 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.88□□□□□ -0.67
GdnfP48540 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.88□□□□□ -0.67
GdnfP48540 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.88□□□□□ -0.67
GdnfP48540 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.88□□□□□ -0.67
GdnfP48540 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.88□□□□□ -0.67
GdnfP48540 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.88□□□□□ -0.67
GdnfP48540 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
GdnfP48540 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.88□□□□□ -0.67
GdnfP48540 AC114573.1-201ENSMUST00000224120 1210 ntBASIC10.88□□□□□ -0.67
GdnfP48540 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.88□□□□□ -0.67
GdnfP48540 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.88□□□□□ -0.67
GdnfP48540 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.88□□□□□ -0.67
GdnfP48540 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.88□□□□□ -0.67
GdnfP48540 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.88□□□□□ -0.67
GdnfP48540 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
GdnfP48540 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
GdnfP48540 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
GdnfP48540 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.87□□□□□ -0.67
GdnfP48540 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.87□□□□□ -0.67
GdnfP48540 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
GdnfP48540 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
GdnfP48540 Gm11478-201ENSMUST00000117851 599 ntBASIC10.87□□□□□ -0.67
GdnfP48540 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.87□□□□□ -0.67
GdnfP48540 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.87□□□□□ -0.67
GdnfP48540 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
GdnfP48540 Gm5745-201ENSMUST00000183748 313 ntBASIC10.87□□□□□ -0.67
GdnfP48540 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.87□□□□□ -0.67
GdnfP48540 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms