Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sox2P48432 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Snord83b-201ENSMUST00000104546 94 ntBASIC11.58□□□□□ -0.56
Sox2P48432 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox2P48432 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.58□□□□□ -0.56
Sox2P48432 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.58□□□□□ -0.56
Sox2P48432 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Gm26185-201ENSMUST00000157692 266 ntBASIC11.58□□□□□ -0.56
Sox2P48432 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Proscos-202ENSMUST00000178990 666 ntBASIC11.58□□□□□ -0.56
Sox2P48432 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.58□□□□□ -0.56
Sox2P48432 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox2P48432 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.58□□□□□ -0.56
Sox2P48432 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.58□□□□□ -0.56
Sox2P48432 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sox2P48432 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Sox2P48432 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sox2P48432 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox2P48432 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox2P48432 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sox2P48432 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox2P48432 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.57□□□□□ -0.56
Sox2P48432 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
Sox2P48432 Gm37922-201ENSMUST00000195596 455 ntBASIC11.57□□□□□ -0.56
Sox2P48432 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.57□□□□□ -0.56
Sox2P48432 Gm8463-201ENSMUST00000208573 613 ntBASIC11.57□□□□□ -0.56
Sox2P48432 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Sox2P48432 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sox2P48432 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sox2P48432 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox2P48432 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox2P48432 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.57□□□□□ -0.56
Sox2P48432 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Sox2P48432 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sox2P48432 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox2P48432 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sox2P48432 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Sox2P48432 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Gm13612-201ENSMUST00000119276 390 ntBASIC11.56□□□□□ -0.56
Sox2P48432 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.56□□□□□ -0.56
Sox2P48432 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox2P48432 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox2P48432 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox2P48432 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox2P48432 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox2P48432 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox2P48432 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox2P48432 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox2P48432 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox2P48432 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Sox2P48432 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Sox2P48432 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms