Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rfx2P48379 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rfx2P48379 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13□□□□□ -0.33
Rfx2P48379 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.99□□□□□ -0.33
Rfx2P48379 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.99□□□□□ -0.33
Rfx2P48379 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.99□□□□□ -0.33
Rfx2P48379 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rfx2P48379 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Rfx2P48379 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.99□□□□□ -0.33
Rfx2P48379 Gm14130-201ENSMUST00000118417 987 ntBASIC12.99□□□□□ -0.33
Rfx2P48379 Gm14109-201ENSMUST00000118814 309 ntBASIC12.99□□□□□ -0.33
Rfx2P48379 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.99□□□□□ -0.33
Rfx2P48379 Gm13736-201ENSMUST00000119272 253 ntBASIC12.99□□□□□ -0.33
Rfx2P48379 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.99□□□□□ -0.33
Rfx2P48379 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.99□□□□□ -0.33
Rfx2P48379 Gm8018-201ENSMUST00000173536 789 ntBASIC12.99□□□□□ -0.33
Rfx2P48379 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Mir3102-201ENSMUST00000175555 104 ntBASIC12.99□□□□□ -0.33
Rfx2P48379 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rfx2P48379 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Gm44967-201ENSMUST00000207047 631 ntBASIC12.99□□□□□ -0.33
Rfx2P48379 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.99□□□□□ -0.33
Rfx2P48379 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.99□□□□□ -0.33
Rfx2P48379 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.99□□□□□ -0.33
Rfx2P48379 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.99□□□□□ -0.33
Rfx2P48379 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rfx2P48379 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rfx2P48379 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.99□□□□□ -0.33
Rfx2P48379 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.99□□□□□ -0.33
Rfx2P48379 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx2P48379 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rfx2P48379 Paupar-201ENSMUST00000194826 3482 ntBASIC12.98□□□□□ -0.33
Rfx2P48379 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.98□□□□□ -0.33
Rfx2P48379 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.98□□□□□ -0.33
Rfx2P48379 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.98□□□□□ -0.33
Rfx2P48379 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.98□□□□□ -0.33
Rfx2P48379 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rfx2P48379 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Gm13813-201ENSMUST00000120998 787 ntBASIC12.98□□□□□ -0.33
Rfx2P48379 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.98□□□□□ -0.33
Rfx2P48379 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.98□□□□□ -0.33
Rfx2P48379 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.98□□□□□ -0.33
Rfx2P48379 Gm25043-201ENSMUST00000158604 212 ntBASIC12.98□□□□□ -0.33
Rfx2P48379 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rfx2P48379 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms