Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.94□□□□□ -0.5
Tnfsf4P43488 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.94□□□□□ -0.5
Tnfsf4P43488 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf4P43488 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tnfsf4P43488 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.93□□□□□ -0.5
Tnfsf4P43488 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Gm11597-201ENSMUST00000121423 964 ntBASIC11.93□□□□□ -0.5
Tnfsf4P43488 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Gm26927-201ENSMUST00000182385 965 ntBASIC11.93□□□□□ -0.5
Tnfsf4P43488 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.93□□□□□ -0.5
Tnfsf4P43488 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.93□□□□□ -0.5
Tnfsf4P43488 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.93□□□□□ -0.5
Tnfsf4P43488 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf4P43488 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.92□□□□□ -0.5
Tnfsf4P43488 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.92□□□□□ -0.5
Tnfsf4P43488 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Gm27839-201ENSMUST00000184242 106 ntBASIC11.92□□□□□ -0.5
Tnfsf4P43488 Gm7561-201ENSMUST00000211203 886 ntBASIC11.92□□□□□ -0.5
Tnfsf4P43488 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.92□□□□□ -0.5
Tnfsf4P43488 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Gm6091-201ENSMUST00000098307 165 ntBASIC11.92□□□□□ -0.5
Tnfsf4P43488 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf4P43488 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Tnfsf4P43488 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms