Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Gm30285-201ENSMUST00000214614 422 ntBASIC11.33□□□□□ -0.6
Nkx2-2P42586 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Gm9368-201ENSMUST00000219348 831 ntBASIC11.33□□□□□ -0.6
Nkx2-2P42586 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.32□□□□□ -0.6
Nkx2-2P42586 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Gm23912-201ENSMUST00000104687 87 ntBASIC11.32□□□□□ -0.6
Nkx2-2P42586 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx2-2P42586 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.32□□□□□ -0.6
Nkx2-2P42586 Gm6621-201ENSMUST00000193251 772 ntBASIC11.32□□□□□ -0.6
Nkx2-2P42586 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.32□□□□□ -0.6
Nkx2-2P42586 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.32□□□□□ -0.6
Nkx2-2P42586 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-2P42586 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.31□□□□□ -0.6
Nkx2-2P42586 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.31□□□□□ -0.6
Nkx2-2P42586 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms