Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.98□□□□□ -0.49
TfamP40630 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.98□□□□□ -0.49
TfamP40630 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.98□□□□□ -0.49
TfamP40630 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Gm9022-201ENSMUST00000182482 992 ntBASIC11.98□□□□□ -0.49
TfamP40630 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.98□□□□□ -0.49
TfamP40630 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.98□□□□□ -0.49
TfamP40630 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TfamP40630 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
TfamP40630 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TfamP40630 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TfamP40630 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TfamP40630 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.97□□□□□ -0.49
TfamP40630 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.97□□□□□ -0.49
TfamP40630 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.97□□□□□ -0.49
TfamP40630 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.97□□□□□ -0.49
TfamP40630 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
TfamP40630 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TfamP40630 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.97□□□□□ -0.49
TfamP40630 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.97□□□□□ -0.49
TfamP40630 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.97□□□□□ -0.49
TfamP40630 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.97□□□□□ -0.49
TfamP40630 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.97□□□□□ -0.49
TfamP40630 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.97□□□□□ -0.49
TfamP40630 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.97□□□□□ -0.49
TfamP40630 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TfamP40630 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TfamP40630 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TfamP40630 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.96□□□□□ -0.49
TfamP40630 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
TfamP40630 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.96□□□□□ -0.49
TfamP40630 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.96□□□□□ -0.49
TfamP40630 Gm12502-201ENSMUST00000120197 444 ntBASIC11.96□□□□□ -0.49
TfamP40630 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
TfamP40630 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TfamP40630 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.96□□□□□ -0.49
TfamP40630 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.96□□□□□ -0.49
TfamP40630 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TfamP40630 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.96□□□□□ -0.49
TfamP40630 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.96□□□□□ -0.49
TfamP40630 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms