Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox5P35710 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox5P35710 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox5P35710 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sox5P35710 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox5P35710 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox5P35710 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Sox5P35710 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox5P35710 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Sox5P35710 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.49□□□□□ -0.25
Sox5P35710 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sox5P35710 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Gm9083-201ENSMUST00000120423 819 ntBASIC13.49□□□□□ -0.25
Sox5P35710 Gm11434-201ENSMUST00000122379 629 ntBASIC13.49□□□□□ -0.25
Sox5P35710 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox5P35710 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Sox5P35710 Gm26927-201ENSMUST00000182385 965 ntBASIC13.49□□□□□ -0.25
Sox5P35710 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
Sox5P35710 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sox5P35710 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox5P35710 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox5P35710 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.48□□□□□ -0.25
Sox5P35710 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.48□□□□□ -0.25
Sox5P35710 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
Sox5P35710 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.48□□□□□ -0.25
Sox5P35710 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Gm27486-201ENSMUST00000184923 80 ntBASIC13.48□□□□□ -0.25
Sox5P35710 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox5P35710 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.48□□□□□ -0.25
Sox5P35710 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.48□□□□□ -0.25
Sox5P35710 Gm7561-201ENSMUST00000211203 886 ntBASIC13.48□□□□□ -0.25
Sox5P35710 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox5P35710 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sox5P35710 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox5P35710 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Sox5P35710 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Sox5P35710 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Cog3-203ENSMUST00000227473 4197 ntBASIC13.48□□□□□ -0.25
Sox5P35710 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Sox5P35710 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox5P35710 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox5P35710 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox5P35710 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox5P35710 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Sox5P35710 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox5P35710 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox5P35710 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox5P35710 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox5P35710 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox5P35710 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.47□□□□□ -0.25
Sox5P35710 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox5P35710 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox5P35710 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox5P35710 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox5P35710 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sox5P35710 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox5P35710 Gm9002-201ENSMUST00000178437 499 ntBASIC13.47□□□□□ -0.25
Sox5P35710 Gm27847-201ENSMUST00000183711 107 ntBASIC13.47□□□□□ -0.25
Sox5P35710 Gm27375-201ENSMUST00000183799 107 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms