Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm28631-201ENSMUST00000190740 334 ntBASIC13.05□□□□□ -0.32
Rfc1P35601 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Rfc1P35601 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Rfc1P35601 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.05□□□□□ -0.32
Rfc1P35601 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rfc1P35601 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.05□□□□□ -0.32
Rfc1P35601 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rfc1P35601 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.05□□□□□ -0.32
Rfc1P35601 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rfc1P35601 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.05□□□□□ -0.32
Rfc1P35601 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Rfc1P35601 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.05□□□□□ -0.32
Rfc1P35601 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.05□□□□□ -0.32
Rfc1P35601 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.05□□□□□ -0.32
Rfc1P35601 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.04□□□□□ -0.32
Rfc1P35601 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.04□□□□□ -0.32
Rfc1P35601 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.04□□□□□ -0.32
Rfc1P35601 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.04□□□□□ -0.32
Rfc1P35601 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.04□□□□□ -0.32
Rfc1P35601 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Gm27437-201ENSMUST00000183429 107 ntBASIC13.04□□□□□ -0.32
Rfc1P35601 Mir6977-201ENSMUST00000184960 64 ntBASIC13.04□□□□□ -0.32
Rfc1P35601 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Gm10576-201ENSMUST00000191927 825 ntBASIC13.04□□□□□ -0.32
Rfc1P35601 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.04□□□□□ -0.32
Rfc1P35601 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rfc1P35601 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rfc1P35601 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rfc1P35601 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rfc1P35601 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Rfc1P35601 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.04□□□□□ -0.32
Rfc1P35601 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfc1P35601 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.04□□□□□ -0.32
Rfc1P35601 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.03□□□□□ -0.32
Rfc1P35601 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rfc1P35601 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rfc1P35601 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.03□□□□□ -0.32
Rfc1P35601 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC13.03□□□□□ -0.32
Rfc1P35601 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Gm12341-201ENSMUST00000119724 503 ntBASIC13.03□□□□□ -0.32
Rfc1P35601 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.03□□□□□ -0.32
Rfc1P35601 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.03□□□□□ -0.32
Rfc1P35601 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Gm8227-201ENSMUST00000223306 571 ntBASIC13.03□□□□□ -0.32
Rfc1P35601 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rfc1P35601 Gm2423-201ENSMUST00000074863 733 ntBASIC13.03□□□□□ -0.32
Rfc1P35601 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC13.03□□□□□ -0.32
Rfc1P35601 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfc1P35601 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms