Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.43□□□□□ -0.58
Sftpa1P35242 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.43□□□□□ -0.58
Sftpa1P35242 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Sftpa1P35242 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sftpa1P35242 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.42□□□□□ -0.58
Sftpa1P35242 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.42□□□□□ -0.58
Sftpa1P35242 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sftpa1P35242 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sftpa1P35242 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.42□□□□□ -0.58
Sftpa1P35242 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.42□□□□□ -0.58
Sftpa1P35242 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.42□□□□□ -0.58
Sftpa1P35242 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.42□□□□□ -0.58
Sftpa1P35242 Gm24891-201ENSMUST00000104391 136 ntBASIC11.42□□□□□ -0.58
Sftpa1P35242 Gm11340-201ENSMUST00000119226 412 ntBASIC11.42□□□□□ -0.58
Sftpa1P35242 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.42□□□□□ -0.58
Sftpa1P35242 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Gm8492-201ENSMUST00000182375 987 ntBASIC11.42□□□□□ -0.58
Sftpa1P35242 Gm9358-201ENSMUST00000183067 927 ntBASIC11.42□□□□□ -0.58
Sftpa1P35242 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Gm28324-201ENSMUST00000187913 264 ntBASIC11.42□□□□□ -0.58
Sftpa1P35242 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.42□□□□□ -0.58
Sftpa1P35242 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.42□□□□□ -0.58
Sftpa1P35242 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.42□□□□□ -0.58
Sftpa1P35242 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sftpa1P35242 Snora73b-201ENSMUST00000083419 205 ntBASIC11.42□□□□□ -0.58
Sftpa1P35242 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sftpa1P35242 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sftpa1P35242 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Sftpa1P35242 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.42□□□□□ -0.58
Sftpa1P35242 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sftpa1P35242 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sftpa1P35242 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.41□□□□□ -0.58
Sftpa1P35242 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Sftpa1P35242 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.41□□□□□ -0.58
Sftpa1P35242 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.41□□□□□ -0.58
Sftpa1P35242 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sftpa1P35242 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Sftpa1P35242 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.41□□□□□ -0.58
Sftpa1P35242 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.41□□□□□ -0.58
Sftpa1P35242 Gm11509-201ENSMUST00000117358 325 ntBASIC11.41□□□□□ -0.58
Sftpa1P35242 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.41□□□□□ -0.58
Sftpa1P35242 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.41□□□□□ -0.58
Sftpa1P35242 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.41□□□□□ -0.58
Sftpa1P35242 Gm25072-201ENSMUST00000175233 235 ntBASIC11.41□□□□□ -0.58
Sftpa1P35242 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.41□□□□□ -0.58
Sftpa1P35242 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.41□□□□□ -0.58
Sftpa1P35242 Gm43184-201ENSMUST00000197247 542 ntBASIC11.41□□□□□ -0.58
Sftpa1P35242 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.41□□□□□ -0.58
Sftpa1P35242 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.41□□□□□ -0.58
Sftpa1P35242 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.41□□□□□ -0.58
Sftpa1P35242 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.41□□□□□ -0.58
Sftpa1P35242 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.41□□□□□ -0.58
Sftpa1P35242 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sftpa1P35242 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms