Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Slc6a1P31648 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.67□□□□□ -0.7
Slc6a1P31648 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.67□□□□□ -0.7
Slc6a1P31648 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Slc6a1P31648 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Slc6a1P31648 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.67□□□□□ -0.7
Slc6a1P31648 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.67□□□□□ -0.7
Slc6a1P31648 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.66□□□□□ -0.7
Slc6a1P31648 Gm12341-201ENSMUST00000119724 503 ntBASIC10.66□□□□□ -0.7
Slc6a1P31648 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Mir7654-201ENSMUST00000185082 70 ntBASIC10.66□□□□□ -0.7
Slc6a1P31648 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Gm9908-201ENSMUST00000211534 448 ntBASIC10.66□□□□□ -0.7
Slc6a1P31648 Gm17794-201ENSMUST00000220252 955 ntBASIC10.66□□□□□ -0.7
Slc6a1P31648 Gm24447-201ENSMUST00000083977 338 ntBASIC10.66□□□□□ -0.7
Slc6a1P31648 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.66□□□□□ -0.7
Slc6a1P31648 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Btrc-209ENSMUST00000224478 2194 ntBASIC10.66□□□□□ -0.7
Slc6a1P31648 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.66□□□□□ -0.7
Slc6a1P31648 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Slc6a1P31648 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Slc6a1P31648 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Slc6a1P31648 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
Slc6a1P31648 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Slc6a1P31648 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Slc6a1P31648 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.65□□□□□ -0.7
Slc6a1P31648 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Slc6a1P31648 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.65□□□□□ -0.7
Slc6a1P31648 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms