Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.91□□□□□ -0.5
BdnfP21237 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.91□□□□□ -0.5
BdnfP21237 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
BdnfP21237 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
BdnfP21237 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
BdnfP21237 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.9□□□□□ -0.5
BdnfP21237 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
BdnfP21237 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.9□□□□□ -0.5
BdnfP21237 Gm37497-201ENSMUST00000195830 798 ntBASIC11.9□□□□□ -0.5
BdnfP21237 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.9□□□□□ -0.5
BdnfP21237 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.9□□□□□ -0.5
BdnfP21237 Gm9794-201ENSMUST00000202370 423 ntBASIC11.9□□□□□ -0.5
BdnfP21237 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.9□□□□□ -0.5
BdnfP21237 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.9□□□□□ -0.5
BdnfP21237 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
BdnfP21237 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
BdnfP21237 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
BdnfP21237 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.9□□□□□ -0.5
BdnfP21237 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
BdnfP21237 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
BdnfP21237 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
BdnfP21237 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
BdnfP21237 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
BdnfP21237 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.89□□□□□ -0.51
BdnfP21237 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.89□□□□□ -0.51
BdnfP21237 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
BdnfP21237 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.89□□□□□ -0.51
BdnfP21237 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.89□□□□□ -0.51
BdnfP21237 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Gm14921-201ENSMUST00000118643 908 ntBASIC11.89□□□□□ -0.51
BdnfP21237 Gm12490-201ENSMUST00000120255 560 ntBASIC11.89□□□□□ -0.51
BdnfP21237 Gm22331-201ENSMUST00000158066 136 ntBASIC11.89□□□□□ -0.51
BdnfP21237 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.89□□□□□ -0.51
BdnfP21237 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.89□□□□□ -0.51
BdnfP21237 Gm8227-201ENSMUST00000223306 571 ntBASIC11.89□□□□□ -0.51
BdnfP21237 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
BdnfP21237 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.89□□□□□ -0.51
BdnfP21237 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
BdnfP21237 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
BdnfP21237 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
BdnfP21237 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
BdnfP21237 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.89□□□□□ -0.51
BdnfP21237 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
BdnfP21237 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.88□□□□□ -0.51
BdnfP21237 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms