Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Cdx1P18111 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cdx1P18111 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.04□□□□□ -0.8
Cdx1P18111 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cdx1P18111 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.04□□□□□ -0.8
Cdx1P18111 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Gm15240-201ENSMUST00000118156 720 ntBASIC10.04□□□□□ -0.8
Cdx1P18111 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.04□□□□□ -0.8
Cdx1P18111 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.04□□□□□ -0.8
Cdx1P18111 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cdx1P18111 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.04□□□□□ -0.8
Cdx1P18111 Gm6244-201ENSMUST00000178732 841 ntBASIC10.04□□□□□ -0.8
Cdx1P18111 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.04□□□□□ -0.8
Cdx1P18111 Gm37714-201ENSMUST00000194742 342 ntBASIC10.04□□□□□ -0.8
Cdx1P18111 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.04□□□□□ -0.8
Cdx1P18111 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.04□□□□□ -0.8
Cdx1P18111 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Cdx1P18111 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.04□□□□□ -0.8
Cdx1P18111 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cdx1P18111 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.04□□□□□ -0.8
Cdx1P18111 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.04□□□□□ -0.8
Cdx1P18111 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx1P18111 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.03□□□□□ -0.8
Cdx1P18111 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.03□□□□□ -0.8
Cdx1P18111 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.03□□□□□ -0.8
Cdx1P18111 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.03□□□□□ -0.8
Cdx1P18111 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Cdx1P18111 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.03□□□□□ -0.8
Cdx1P18111 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Gm11425-201ENSMUST00000119608 498 ntBASIC10.03□□□□□ -0.8
Cdx1P18111 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.03□□□□□ -0.8
Cdx1P18111 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.03□□□□□ -0.8
Cdx1P18111 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.03□□□□□ -0.8
Cdx1P18111 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.03□□□□□ -0.8
Cdx1P18111 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.03□□□□□ -0.8
Cdx1P18111 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Cdx1P18111 Gm45841-201ENSMUST00000207700 164 ntBASIC10.03□□□□□ -0.8
Cdx1P18111 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.03□□□□□ -0.8
Cdx1P18111 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Cdx1P18111 Gm18027-201ENSMUST00000218947 619 ntBASIC10.03□□□□□ -0.8
Cdx1P18111 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.03□□□□□ -0.8
Cdx1P18111 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Gm9396-201ENSMUST00000076703 567 ntBASIC10.03□□□□□ -0.8
Cdx1P18111 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Cdx1P18111 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Cdx1P18111 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Cdx1P18111 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Cdx1P18111 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms