Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.89□□□□□ -0.51
Cntn1P12960 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cntn1P12960 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cntn1P12960 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cntn1P12960 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cntn1P12960 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cntn1P12960 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cntn1P12960 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cntn1P12960 Gm12997-201ENSMUST00000120207 640 ntBASIC11.88□□□□□ -0.51
Cntn1P12960 Gm13665-201ENSMUST00000120830 528 ntBASIC11.88□□□□□ -0.51
Cntn1P12960 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.88□□□□□ -0.51
Cntn1P12960 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.88□□□□□ -0.51
Cntn1P12960 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.88□□□□□ -0.51
Cntn1P12960 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cntn1P12960 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.88□□□□□ -0.51
Cntn1P12960 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.88□□□□□ -0.51
Cntn1P12960 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Cntn1P12960 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.88□□□□□ -0.51
Cntn1P12960 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Cntn1P12960 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cntn1P12960 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cntn1P12960 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.88□□□□□ -0.51
Cntn1P12960 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cntn1P12960 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cntn1P12960 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cntn1P12960 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.87□□□□□ -0.51
Cntn1P12960 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cntn1P12960 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Cntn1P12960 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cntn1P12960 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cntn1P12960 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.87□□□□□ -0.51
Cntn1P12960 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Cntn1P12960 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.87□□□□□ -0.51
Cntn1P12960 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cntn1P12960 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.87□□□□□ -0.51
Cntn1P12960 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.87□□□□□ -0.51
Cntn1P12960 Gm44651-201ENSMUST00000207343 372 ntBASIC11.87□□□□□ -0.51
Cntn1P12960 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.87□□□□□ -0.51
Cntn1P12960 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.87□□□□□ -0.51
Cntn1P12960 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cntn1P12960 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cntn1P12960 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cntn1P12960 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cntn1P12960 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms