Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h2P0C090 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.65□□□□□ -0.38
Rc3h2P0C090 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.65□□□□□ -0.38
Rc3h2P0C090 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.65□□□□□ -0.38
Rc3h2P0C090 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rc3h2P0C090 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Rc3h2P0C090 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rc3h2P0C090 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Gm23200-201ENSMUST00000104379 132 ntBASIC12.64□□□□□ -0.39
Rc3h2P0C090 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.64□□□□□ -0.39
Rc3h2P0C090 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Gm12566-201ENSMUST00000121479 359 ntBASIC12.64□□□□□ -0.39
Rc3h2P0C090 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Gm37666-201ENSMUST00000194110 866 ntBASIC12.64□□□□□ -0.39
Rc3h2P0C090 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Gm44958-201ENSMUST00000203734 736 ntBASIC12.64□□□□□ -0.39
Rc3h2P0C090 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.64□□□□□ -0.39
Rc3h2P0C090 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.64□□□□□ -0.39
Rc3h2P0C090 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.64□□□□□ -0.39
Rc3h2P0C090 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.64□□□□□ -0.39
Rc3h2P0C090 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h2P0C090 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.63□□□□□ -0.39
Rc3h2P0C090 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.63□□□□□ -0.39
Rc3h2P0C090 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Gm3786-201ENSMUST00000202659 378 ntBASIC12.63□□□□□ -0.39
Rc3h2P0C090 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.63□□□□□ -0.39
Rc3h2P0C090 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.63□□□□□ -0.39
Rc3h2P0C090 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h2P0C090 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms