Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.1□□□□□ -0.31
Hoxc8P09025 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hoxc8P09025 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.1□□□□□ -0.31
Hoxc8P09025 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc8P09025 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.09□□□□□ -0.31
Hoxc8P09025 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hoxc8P09025 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hoxc8P09025 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hoxc8P09025 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.09□□□□□ -0.31
Hoxc8P09025 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Hoxc8P09025 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.09□□□□□ -0.31
Hoxc8P09025 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.09□□□□□ -0.31
Hoxc8P09025 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.09□□□□□ -0.31
Hoxc8P09025 Gm11956-201ENSMUST00000119525 512 ntBASIC13.09□□□□□ -0.31
Hoxc8P09025 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.09□□□□□ -0.31
Hoxc8P09025 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.09□□□□□ -0.31
Hoxc8P09025 Gm22138-201ENSMUST00000158748 128 ntBASIC13.09□□□□□ -0.31
Hoxc8P09025 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.09□□□□□ -0.31
Hoxc8P09025 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.09□□□□□ -0.31
Hoxc8P09025 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Hoxc8P09025 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc8P09025 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Hoxc8P09025 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hoxc8P09025 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.08□□□□□ -0.31
Hoxc8P09025 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.08□□□□□ -0.32
Hoxc8P09025 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.08□□□□□ -0.32
Hoxc8P09025 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.08□□□□□ -0.32
Hoxc8P09025 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Hoxc8P09025 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Hoxc8P09025 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Hoxc8P09025 Gm22920-201ENSMUST00000102175 109 ntBASIC13.08□□□□□ -0.32
Hoxc8P09025 Gm14193-201ENSMUST00000105067 153 ntBASIC13.08□□□□□ -0.32
Hoxc8P09025 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.08□□□□□ -0.32
Hoxc8P09025 Gm8737-201ENSMUST00000122208 642 ntBASIC13.08□□□□□ -0.32
Hoxc8P09025 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.08□□□□□ -0.32
Hoxc8P09025 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.08□□□□□ -0.32
Hoxc8P09025 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.08□□□□□ -0.32
Hoxc8P09025 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.08□□□□□ -0.32
Hoxc8P09025 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.08□□□□□ -0.32
Hoxc8P09025 Gm7600-201ENSMUST00000209657 785 ntBASIC13.08□□□□□ -0.32
Hoxc8P09025 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.08□□□□□ -0.32
Hoxc8P09025 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.08□□□□□ -0.32
Hoxc8P09025 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Acot6-202ENSMUST00000222921 3622 ntBASIC13.08□□□□□ -0.32
Hoxc8P09025 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.08□□□□□ -0.32
Hoxc8P09025 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc8P09025 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc8P09025 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc8P09025 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Hoxc8P09025 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms