Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm1848-201ENSMUST00000120711 789 ntBASIC14.91□□□□□ -0.02
Col4a1P02463 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.91□□□□□ -0.02
Col4a1P02463 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC14.91□□□□□ -0.02
Col4a1P02463 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.91□□□□□ -0.02
Col4a1P02463 Gm8342-201ENSMUST00000209839 757 ntBASIC14.91□□□□□ -0.02
Col4a1P02463 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Col4a1P02463 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col4a1P02463 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
Col4a1P02463 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a1P02463 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC14.9□□□□□ -0.02
Col4a1P02463 Gm23153-201ENSMUST00000175323 313 ntBASIC14.9□□□□□ -0.02
Col4a1P02463 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.9□□□□□ -0.02
Col4a1P02463 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col4a1P02463 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.9□□□□□ -0.02
Col4a1P02463 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col4a1P02463 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col4a1P02463 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.9□□□□□ -0.02
Col4a1P02463 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.9□□□□□ -0.02
Col4a1P02463 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.9□□□□□ -0.02
Col4a1P02463 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col4a1P02463 Gm12990-201ENSMUST00000120372 468 ntBASIC14.9□□□□□ -0.02
Col4a1P02463 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.9□□□□□ -0.02
Col4a1P02463 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC14.9□□□□□ -0.02
Col4a1P02463 AC165260.2-203ENSMUST00000224237 336 ntBASIC14.9□□□□□ -0.02
Col4a1P02463 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col4a1P02463 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.9□□□□□ -0.02
Col4a1P02463 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.9□□□□□ -0.02
Col4a1P02463 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.9□□□□□ -0.02
Col4a1P02463 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col4a1P02463 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col4a1P02463 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col4a1P02463 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Col4a1P02463 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col4a1P02463 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col4a1P02463 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Col4a1P02463 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col4a1P02463 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col4a1P02463 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.89□□□□□ -0.03
Col4a1P02463 Gm11660-201ENSMUST00000120955 412 ntBASIC14.89□□□□□ -0.03
Col4a1P02463 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col4a1P02463 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.89□□□□□ -0.03
Col4a1P02463 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col4a1P02463 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC14.89□□□□□ -0.03
Col4a1P02463 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.89□□□□□ -0.03
Col4a1P02463 Olfr584-201ENSMUST00000098210 964 ntBASIC14.89□□□□□ -0.03
Col4a1P02463 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col4a1P02463 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col4a1P02463 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col4a1P02463 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.89□□□□□ -0.03
Col4a1P02463 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col4a1P02463 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col4a1P02463 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col4a1P02463 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col4a1P02463 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Col4a1P02463 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Col4a1P02463 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Col4a1P02463 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Col4a1P02463 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col4a1P02463 Gm16397-201ENSMUST00000122201 494 ntBASIC14.88□□□□□ -0.03
Col4a1P02463 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms