Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Gm10226O88253 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 Gm2260-201ENSMUST00000184965 657 ntBASIC9.53□□□□□ -0.88
Gm10226O88253 Gm4034-201ENSMUST00000187674 480 ntBASIC9.53□□□□□ -0.88
Gm10226O88253 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.53□□□□□ -0.88
Gm10226O88253 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 Gm17812-201ENSMUST00000204935 318 ntBASIC9.53□□□□□ -0.88
Gm10226O88253 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.53□□□□□ -0.88
Gm10226O88253 AC159747.1-201ENSMUST00000219903 265 ntBASIC9.53□□□□□ -0.88
Gm10226O88253 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Gm10226O88253 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Gm10226O88253 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.53□□□□□ -0.88
Gm10226O88253 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Gm10226O88253 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.53□□□□□ -0.88
Gm10226O88253 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Gm10226O88253 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10226O88253 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10226O88253 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10226O88253 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.52□□□□□ -0.88
Gm10226O88253 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10226O88253 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10226O88253 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Gm10226O88253 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.52□□□□□ -0.88
Gm10226O88253 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10226O88253 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.88
Gm10226O88253 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10226O88253 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Gm10226O88253 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.52□□□□□ -0.89
Gm10226O88253 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.52□□□□□ -0.89
Gm10226O88253 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.52□□□□□ -0.89
Gm10226O88253 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.89
Gm10226O88253 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.52□□□□□ -0.89
Gm10226O88253 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.52□□□□□ -0.89
Gm10226O88253 Gm45433-201ENSMUST00000209386 247 ntBASIC9.52□□□□□ -0.89
Gm10226O88253 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC9.52□□□□□ -0.89
Gm10226O88253 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Gm10226O88253 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.52□□□□□ -0.89
Gm10226O88253 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.89
Gm10226O88253 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Gm10226O88253 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.52□□□□□ -0.89
Gm10226O88253 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.52□□□□□ -0.89
Gm10226O88253 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Gm10226O88253 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10226O88253 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10226O88253 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Gm10226O88253 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10226O88253 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10226O88253 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10226O88253 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10226O88253 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC9.51□□□□□ -0.89
Gm10226O88253 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC9.51□□□□□ -0.89
Gm10226O88253 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Gm10226O88253 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Gm10226O88253 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10226O88253 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10226O88253 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10226O88253 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10226O88253 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10226O88253 Gm11439-201ENSMUST00000118598 409 ntBASIC9.51□□□□□ -0.89
Gm10226O88253 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10226O88253 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10226O88253 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.51□□□□□ -0.89
Gm10226O88253 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10226O88253 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms