Protein–RNA interactions for Protein: O70479

Tnfaip1, BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip1O70479 Gm17831-201ENSMUST00000205579 900 ntBASIC13.01□□□□□ -0.33
Tnfaip1O70479 Gm9463-201ENSMUST00000206707 601 ntBASIC13.01□□□□□ -0.33
Tnfaip1O70479 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.01□□□□□ -0.33
Tnfaip1O70479 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.01□□□□□ -0.33
Tnfaip1O70479 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.01□□□□□ -0.33
Tnfaip1O70479 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfaip1O70479 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.01□□□□□ -0.33
Tnfaip1O70479 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tnfaip1O70479 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tnfaip1O70479 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tnfaip1O70479 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Tnfaip1O70479 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13□□□□□ -0.33
Tnfaip1O70479 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Tnfaip1O70479 Gm14150-201ENSMUST00000122404 1354 ntBASIC13□□□□□ -0.33
Tnfaip1O70479 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13□□□□□ -0.33
Tnfaip1O70479 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tnfaip1O70479 Gm23912-201ENSMUST00000104687 87 ntBASIC13□□□□□ -0.33
Tnfaip1O70479 Gm11663-201ENSMUST00000117888 290 ntBASIC13□□□□□ -0.33
Tnfaip1O70479 Gm11246-201ENSMUST00000120880 345 ntBASIC13□□□□□ -0.33
Tnfaip1O70479 Gm16397-201ENSMUST00000122201 494 ntBASIC13□□□□□ -0.33
Tnfaip1O70479 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tnfaip1O70479 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Gm28686-201ENSMUST00000187404 609 ntBASIC13□□□□□ -0.33
Tnfaip1O70479 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13□□□□□ -0.33
Tnfaip1O70479 Gm10752-201ENSMUST00000218348 729 ntBASIC13□□□□□ -0.33
Tnfaip1O70479 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13□□□□□ -0.33
Tnfaip1O70479 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13□□□□□ -0.33
Tnfaip1O70479 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfaip1O70479 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tnfaip1O70479 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.99□□□□□ -0.33
Tnfaip1O70479 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfaip1O70479 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.99□□□□□ -0.33
Tnfaip1O70479 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.99□□□□□ -0.33
Tnfaip1O70479 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 164.6 ms