Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Itgb3O54890 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Itgb3O54890 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Itgb3O54890 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Itgb3O54890 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Itgb3O54890 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Itgb3O54890 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Itgb3O54890 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Itgb3O54890 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Itgb3O54890 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Itgb3O54890 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.11□□□□□ -0.31
Itgb3O54890 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.11□□□□□ -0.31
Itgb3O54890 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.11□□□□□ -0.31
Itgb3O54890 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.11□□□□□ -0.31
Itgb3O54890 Gm19187-201ENSMUST00000206781 892 ntBASIC13.11□□□□□ -0.31
Itgb3O54890 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.11□□□□□ -0.31
Itgb3O54890 Gm19994-201ENSMUST00000217086 586 ntBASIC13.11□□□□□ -0.31
Itgb3O54890 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.11□□□□□ -0.31
Itgb3O54890 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.11□□□□□ -0.31
Itgb3O54890 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Itgb3O54890 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Itgb3O54890 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Itgb3O54890 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Itgb3O54890 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Itgb3O54890 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Itgb3O54890 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.1□□□□□ -0.31
Itgb3O54890 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Itgb3O54890 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.1□□□□□ -0.31
Itgb3O54890 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Gm12997-201ENSMUST00000120207 640 ntBASIC13.1□□□□□ -0.31
Itgb3O54890 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.1□□□□□ -0.31
Itgb3O54890 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.1□□□□□ -0.31
Itgb3O54890 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Gm9630-201ENSMUST00000178304 885 ntBASIC13.1□□□□□ -0.31
Itgb3O54890 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Itgb3O54890 Gm9230-201ENSMUST00000188228 532 ntBASIC13.1□□□□□ -0.31
Itgb3O54890 Gm32999-201ENSMUST00000192693 562 ntBASIC13.1□□□□□ -0.31
Itgb3O54890 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.1□□□□□ -0.31
Itgb3O54890 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.1□□□□□ -0.31
Itgb3O54890 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Itgb3O54890 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Itgb3O54890 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.1□□□□□ -0.31
Itgb3O54890 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Itgb3O54890 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Itgb3O54890 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Itgb3O54890 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Itgb3O54890 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Itgb3O54890 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Itgb3O54890 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms