Protein–RNA interactions for Protein: O54798

Brs3, Bombesin receptor subtype-3, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brs3O54798 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Brs3O54798 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Brs3O54798 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Brs3O54798 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Brs3O54798 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Brs3O54798 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Brs3O54798 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Brs3O54798 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Brs3O54798 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Brs3O54798 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Brs3O54798 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Brs3O54798 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Brs3O54798 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Brs3O54798 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.27□□□□□ -0.76
Brs3O54798 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Brs3O54798 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Brs3O54798 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Brs3O54798 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.27□□□□□ -0.77
Brs3O54798 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Brs3O54798 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Brs3O54798 Gm14726-201ENSMUST00000120623 896 ntBASIC10.27□□□□□ -0.77
Brs3O54798 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Gm25668-201ENSMUST00000157700 129 ntBASIC10.27□□□□□ -0.77
Brs3O54798 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Brs3O54798 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.27□□□□□ -0.77
Brs3O54798 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.27□□□□□ -0.77
Brs3O54798 Gm31256-201ENSMUST00000194705 506 ntBASIC10.27□□□□□ -0.77
Brs3O54798 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.27□□□□□ -0.77
Brs3O54798 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Brs3O54798 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.27□□□□□ -0.77
Brs3O54798 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.27□□□□□ -0.77
Brs3O54798 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.27□□□□□ -0.77
Brs3O54798 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Map1b-203ENSMUST00000223725 2669 ntBASIC10.27□□□□□ -0.77
Brs3O54798 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Brs3O54798 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Brs3O54798 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Brs3O54798 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.26□□□□□ -0.77
Brs3O54798 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Brs3O54798 Cog3-203ENSMUST00000227473 4197 ntBASIC10.26□□□□□ -0.77
Brs3O54798 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Brs3O54798 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.26□□□□□ -0.77
Brs3O54798 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Brs3O54798 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.26□□□□□ -0.77
Brs3O54798 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.26□□□□□ -0.77
Brs3O54798 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Brs3O54798 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
Brs3O54798 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Brs3O54798 Gm8018-201ENSMUST00000173536 789 ntBASIC10.26□□□□□ -0.77
Brs3O54798 Gm7584-201ENSMUST00000175829 940 ntBASIC10.26□□□□□ -0.77
Brs3O54798 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Gm37201-201ENSMUST00000191845 523 ntBASIC10.26□□□□□ -0.77
Brs3O54798 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.26□□□□□ -0.77
Brs3O54798 Gm30285-201ENSMUST00000214614 422 ntBASIC10.26□□□□□ -0.77
Brs3O54798 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.26□□□□□ -0.77
Brs3O54798 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.26□□□□□ -0.77
Brs3O54798 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.26□□□□□ -0.77
Brs3O54798 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Brs3O54798 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Brs3O54798 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Brs3O54798 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Brs3O54798 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms