Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Per1O35973 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Per1O35973 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Per1O35973 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Per1O35973 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Per1O35973 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Per1O35973 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Per1O35973 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.38□□□□□ -0.27
Per1O35973 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Per1O35973 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.38□□□□□ -0.27
Per1O35973 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Per1O35973 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Gm7857-201ENSMUST00000117957 358 ntBASIC13.38□□□□□ -0.27
Per1O35973 Gm4909-201ENSMUST00000118749 794 ntBASIC13.38□□□□□ -0.27
Per1O35973 Gm12380-201ENSMUST00000119012 544 ntBASIC13.38□□□□□ -0.27
Per1O35973 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.38□□□□□ -0.27
Per1O35973 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.38□□□□□ -0.27
Per1O35973 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.38□□□□□ -0.27
Per1O35973 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.38□□□□□ -0.27
Per1O35973 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.38□□□□□ -0.27
Per1O35973 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.38□□□□□ -0.27
Per1O35973 Gm5706-201ENSMUST00000181525 993 ntBASIC13.38□□□□□ -0.27
Per1O35973 Gm27341-201ENSMUST00000183570 106 ntBASIC13.38□□□□□ -0.27
Per1O35973 Gm27627-201ENSMUST00000183644 150 ntBASIC13.38□□□□□ -0.27
Per1O35973 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.38□□□□□ -0.27
Per1O35973 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.38□□□□□ -0.27
Per1O35973 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.38□□□□□ -0.27
Per1O35973 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Per1O35973 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.38□□□□□ -0.27
Per1O35973 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.38□□□□□ -0.27
Per1O35973 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.38□□□□□ -0.27
Per1O35973 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Per1O35973 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.38□□□□□ -0.27
Per1O35973 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Per1O35973 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.38□□□□□ -0.27
Per1O35973 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Per1O35973 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Per1O35973 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Per1O35973 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Gm5419-201ENSMUST00000119301 527 ntBASIC13.37□□□□□ -0.27
Per1O35973 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Per1O35973 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Per1O35973 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Per1O35973 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.37□□□□□ -0.27
Per1O35973 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.37□□□□□ -0.27
Per1O35973 Gm18893-201ENSMUST00000198416 943 ntBASIC13.37□□□□□ -0.27
Per1O35973 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Gm270-201ENSMUST00000223010 976 ntBASIC13.37□□□□□ -0.27
Per1O35973 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.37□□□□□ -0.27
Per1O35973 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.37□□□□□ -0.27
Per1O35973 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Per1O35973 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Per1O35973 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Per1O35973 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Per1O35973 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Per1O35973 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms