Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trove2O08848 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trove2O08848 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.74□□□□□ -0.37
Trove2O08848 Gm38671-201ENSMUST00000200573 130 ntBASIC12.74□□□□□ -0.37
Trove2O08848 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.74□□□□□ -0.37
Trove2O08848 Gm9908-201ENSMUST00000211534 448 ntBASIC12.74□□□□□ -0.37
Trove2O08848 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.74□□□□□ -0.37
Trove2O08848 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Trove2O08848 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trove2O08848 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trove2O08848 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trove2O08848 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trove2O08848 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trove2O08848 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trove2O08848 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.73□□□□□ -0.37
Trove2O08848 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Trove2O08848 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trove2O08848 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trove2O08848 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.73□□□□□ -0.37
Trove2O08848 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trove2O08848 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Gm14350-201ENSMUST00000116642 640 ntBASIC12.73□□□□□ -0.37
Trove2O08848 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.73□□□□□ -0.37
Trove2O08848 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.73□□□□□ -0.37
Trove2O08848 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.73□□□□□ -0.37
Trove2O08848 Gm8463-201ENSMUST00000208573 613 ntBASIC12.73□□□□□ -0.37
Trove2O08848 Gm45384-201ENSMUST00000210451 277 ntBASIC12.73□□□□□ -0.37
Trove2O08848 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trove2O08848 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.73□□□□□ -0.37
Trove2O08848 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trove2O08848 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trove2O08848 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trove2O08848 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.72□□□□□ -0.37
Trove2O08848 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.72□□□□□ -0.37
Trove2O08848 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.72□□□□□ -0.37
Trove2O08848 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.72□□□□□ -0.37
Trove2O08848 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.72□□□□□ -0.37
Trove2O08848 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trove2O08848 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trove2O08848 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trove2O08848 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.72□□□□□ -0.37
Trove2O08848 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trove2O08848 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms