Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.74■□□□□ 0.11
ScaperF8VQ70 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.74■□□□□ 0.11
ScaperF8VQ70 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.74■□□□□ 0.11
ScaperF8VQ70 Gm8365-201ENSMUST00000197334 648 ntBASIC15.74■□□□□ 0.11
ScaperF8VQ70 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ScaperF8VQ70 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.73■□□□□ 0.11
ScaperF8VQ70 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Pck2-205ENSMUST00000226352 2784 ntBASIC15.73■□□□□ 0.11
ScaperF8VQ70 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Gm12165-201ENSMUST00000117047 342 ntBASIC15.73■□□□□ 0.11
ScaperF8VQ70 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.73■□□□□ 0.11
ScaperF8VQ70 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.73■□□□□ 0.11
ScaperF8VQ70 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC15.73■□□□□ 0.11
ScaperF8VQ70 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.73■□□□□ 0.11
ScaperF8VQ70 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.73■□□□□ 0.11
ScaperF8VQ70 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ScaperF8VQ70 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.72■□□□□ 0.11
ScaperF8VQ70 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.72■□□□□ 0.11
ScaperF8VQ70 AC122840.1-201ENSMUST00000220915 3334 ntBASIC15.72■□□□□ 0.11
ScaperF8VQ70 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Gm23949-201ENSMUST00000104027 127 ntBASIC15.72■□□□□ 0.11
ScaperF8VQ70 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Gm14058-201ENSMUST00000116082 735 ntBASIC15.72■□□□□ 0.11
ScaperF8VQ70 Gm13035-201ENSMUST00000117496 342 ntBASIC15.72■□□□□ 0.11
ScaperF8VQ70 Gm15515-201ENSMUST00000117827 822 ntBASIC15.72■□□□□ 0.11
ScaperF8VQ70 Gm15711-201ENSMUST00000118889 535 ntBASIC15.72■□□□□ 0.11
ScaperF8VQ70 Gm6039-201ENSMUST00000121667 1250 ntBASIC15.72■□□□□ 0.11
ScaperF8VQ70 Gm17391-201ENSMUST00000171036 126 ntBASIC15.72■□□□□ 0.11
ScaperF8VQ70 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.72■□□□□ 0.11
ScaperF8VQ70 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.72■□□□□ 0.11
ScaperF8VQ70 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ScaperF8VQ70 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.72■□□□□ 0.11
ScaperF8VQ70 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
ScaperF8VQ70 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms