Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm25732-201ENSMUST00000175168 60 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm29615-201ENSMUST00000185371 697 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm28224-201ENSMUST00000186078 697 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm29001-201ENSMUST00000186177 697 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm28292-201ENSMUST00000186593 697 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm28101-201ENSMUST00000187608 697 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm29076-201ENSMUST00000187689 697 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm28302-201ENSMUST00000187931 697 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm28646-201ENSMUST00000188220 697 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm28205-201ENSMUST00000189177 697 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm29032-201ENSMUST00000189797 697 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm28695-201ENSMUST00000190300 697 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm37448-201ENSMUST00000192795 697 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm7003-201ENSMUST00000195089 312 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm18730-201ENSMUST00000218038 343 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Gm9996-201ENSMUST00000070359 913 ntBASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srp54bE9PXC0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Gm9083-201ENSMUST00000120423 819 ntBASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srp54bE9PXC0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms