Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Gm24466-201ENSMUST00000179978 109 ntBASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Gm5178-201ENSMUST00000219380 898 ntBASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Gm14630-201ENSMUST00000118057 246 ntBASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Mir7035-201ENSMUST00000184713 82 ntBASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Gm14113-201ENSMUST00000121399 976 ntBASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Gm14227-201ENSMUST00000119431 629 ntBASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Gm7765-201ENSMUST00000182585 974 ntBASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Gm7565-201ENSMUST00000203611 623 ntBASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Gm37582-201ENSMUST00000192953 1409 ntBASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.97□□□□□ -0.49
Col6a3E9PWQ3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Gm15207-201ENSMUST00000119259 442 ntBASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Gm23432-201ENSMUST00000157181 131 ntBASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Gm25735-201ENSMUST00000175164 215 ntBASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms