Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Gm8805-201ENSMUST00000117848 313 ntBASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Gm16479-201ENSMUST00000121706 932 ntBASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.43□□□□□ -0.42
Gm28043E0CXC2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Gm10146-201ENSMUST00000072739 309 ntBASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.43□□□□□ -0.42
Gm28043E0CXC2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm28043E0CXC2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.42□□□□□ -0.42
Gm28043E0CXC2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms