Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Mir671-201ENSMUST00000102432 98 ntBASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Mir6923-201ENSMUST00000184592 72 ntBASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Gm19640-201ENSMUST00000214849 464 ntBASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Gm16380-201ENSMUST00000077997 478 ntBASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.09■□□□□ 0.33
Hfm1D3Z4R1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hfm1D3Z4R1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Gm12783-201ENSMUST00000121425 397 ntBASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Gm8459-201ENSMUST00000162504 760 ntBASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Gm3726-201ENSMUST00000203110 785 ntBASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 AC129308.3-201ENSMUST00000225652 524 ntBASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hfm1D3Z4R1 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Gm4034-201ENSMUST00000187674 480 ntBASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Gm45779-201ENSMUST00000212189 4064 ntBASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hfm1D3Z4R1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Gm42863-201ENSMUST00000197875 2958 ntBASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hfm1D3Z4R1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms