Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Abhd11os-203ENSMUST00000222613 363 ntBASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tmf1B9EKI3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Gm14017-201ENSMUST00000121934 386 ntBASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Gm24990-201ENSMUST00000157406 323 ntBASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Gm45186-201ENSMUST00000206874 478 ntBASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tmf1B9EKI3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Gm11989-201ENSMUST00000117240 672 ntBASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Gm13996-201ENSMUST00000118456 430 ntBASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Gm11362-201ENSMUST00000118838 850 ntBASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Rprl1-201ENSMUST00000158050 327 ntBASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Gm24514-201ENSMUST00000174961 285 ntBASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Gm4034-201ENSMUST00000187674 480 ntBASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Gm42997-202ENSMUST00000200321 985 ntBASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Tmf1B9EKI3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tmf1B9EKI3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tmf1B9EKI3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tmf1B9EKI3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tmf1B9EKI3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Tmf1B9EKI3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tmf1B9EKI3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tmf1B9EKI3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC16.71■□□□□ 0.27
Tmf1B9EKI3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tmf1B9EKI3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Tmf1B9EKI3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Tmf1B9EKI3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms