Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm29499-201ENSMUST00000189151 486 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 Gm28329-201ENSMUST00000191208 689 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 Gm29171-201ENSMUST00000191397 486 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 Gm5190-201ENSMUST00000192434 357 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 CT025689.1-201ENSMUST00000225214 283 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Gm2420-202ENSMUST00000202224 2249 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Gm12961-201ENSMUST00000120507 1050 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 Gm14006-201ENSMUST00000122132 981 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 Mir432-201ENSMUST00000157230 75 ntBASIC9.95□□□□□ -0.82
Chd6A3KFM7 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Chd6A3KFM7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm7815-201ENSMUST00000196104 832 ntBASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm6423-201ENSMUST00000204315 934 ntBASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm9487-201ENSMUST00000216600 472 ntBASIC9.94□□□□□ -0.82
Chd6A3KFM7 AC117769.1-201ENSMUST00000224716 1120 ntBASIC9.94□□□□□ -0.82
Chd6A3KFM7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm24294-201ENSMUST00000158295 277 ntBASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm8384-201ENSMUST00000190905 704 ntBASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm43852-201ENSMUST00000202098 917 ntBASIC9.94□□□□□ -0.82
Chd6A3KFM7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm9791-201ENSMUST00000060997 447 ntBASIC9.94□□□□□ -0.82
Chd6A3KFM7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Gm6655-201ENSMUST00000201932 1309 ntBASIC9.94□□□□□ -0.82
Chd6A3KFM7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Chd6A3KFM7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.93□□□□□ -0.82
Chd6A3KFM7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Gm26286-201ENSMUST00000104166 134 ntBASIC9.93□□□□□ -0.82
Chd6A3KFM7 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC9.93□□□□□ -0.82
Chd6A3KFM7 Gm13117-201ENSMUST00000120894 691 ntBASIC9.93□□□□□ -0.82
Chd6A3KFM7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.93□□□□□ -0.82
Chd6A3KFM7 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms