Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Gm23119-201ENSMUST00000158610 140 ntBASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc112A0AUP1 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Gm45930-201ENSMUST00000221330 292 ntBASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc112A0AUP1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Gm12502-201ENSMUST00000120197 444 ntBASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Gm1335-201ENSMUST00000121653 386 ntBASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Gm4034-201ENSMUST00000187674 480 ntBASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Gm6007-201ENSMUST00000208170 823 ntBASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms