Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm26464-201ENSMUST00000157094 305 ntBASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm37935-201ENSMUST00000192012 982 ntBASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 AC135669.1-202ENSMUST00000216742 540 ntBASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.4□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.4□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm15371-201ENSMUST00000117057 784 ntBASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm27306-201ENSMUST00000183970 107 ntBASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm43094-201ENSMUST00000196549 921 ntBASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.39□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms