Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Gm11478-201ENSMUST00000117851 599 ntBASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Gm4768-201ENSMUST00000206199 686 ntBASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Gm26035-201ENSMUST00000083065 308 ntBASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5-4A0A075B652 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Gm4271-201ENSMUST00000174444 973 ntBASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Gm7653-201ENSMUST00000214567 508 ntBASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Gm5035-201ENSMUST00000215581 927 ntBASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Gm6091-201ENSMUST00000098307 165 ntBASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5-4A0A075B652 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms