Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm5538W4VSP6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Gm5538W4VSP6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm5538W4VSP6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm5538W4VSP6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm5538W4VSP6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm5538W4VSP6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Gm2991-201ENSMUST00000173338 480 ntBASIC12.62□□□□□ -0.39
Gm5538W4VSP6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Gm27023-201ENSMUST00000182372 285 ntBASIC12.62□□□□□ -0.39
Gm5538W4VSP6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Gm44958-201ENSMUST00000203734 736 ntBASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Gm44882-201ENSMUST00000205702 802 ntBASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm5538W4VSP6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Gm28882-201ENSMUST00000185504 314 ntBASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Gm5538W4VSP6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm5538W4VSP6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Gm5538W4VSP6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Gm5538W4VSP6 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm5538W4VSP6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm5538W4VSP6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm5538W4VSP6 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm5538W4VSP6 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm5538W4VSP6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms