Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scn11aQ9R053 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn11aQ9R053 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scn11aQ9R053 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scn11aQ9R053 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn11aQ9R053 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn11aQ9R053 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.46□□□□□ -0.09
Scn11aQ9R053 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn11aQ9R053 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Scn11aQ9R053 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.46□□□□□ -0.09
Scn11aQ9R053 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn11aQ9R053 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.46□□□□□ -0.09
Scn11aQ9R053 Gm8815-201ENSMUST00000173809 620 ntBASIC14.46□□□□□ -0.09
Scn11aQ9R053 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.46□□□□□ -0.09
Scn11aQ9R053 Mir8115-201ENSMUST00000184992 119 ntBASIC14.46□□□□□ -0.09
Scn11aQ9R053 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn11aQ9R053 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.46□□□□□ -0.09
Scn11aQ9R053 Gm37458-201ENSMUST00000194055 410 ntBASIC14.46□□□□□ -0.09
Scn11aQ9R053 Gm2553-201ENSMUST00000215986 605 ntBASIC14.46□□□□□ -0.09
Scn11aQ9R053 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.46□□□□□ -0.09
Scn11aQ9R053 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn11aQ9R053 Mir483-201ENSMUST00000093631 73 ntBASIC14.46□□□□□ -0.09
Scn11aQ9R053 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn11aQ9R053 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn11aQ9R053 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn11aQ9R053 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn11aQ9R053 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn11aQ9R053 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn11aQ9R053 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn11aQ9R053 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn11aQ9R053 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn11aQ9R053 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn11aQ9R053 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn11aQ9R053 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn11aQ9R053 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn11aQ9R053 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn11aQ9R053 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn11aQ9R053 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Gm9111-201ENSMUST00000219394 709 ntBASIC14.45□□□□□ -0.1
Scn11aQ9R053 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Gm12419-201ENSMUST00000116649 636 ntBASIC14.45□□□□□ -0.1
Scn11aQ9R053 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn11aQ9R053 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.45□□□□□ -0.1
Scn11aQ9R053 Gm17831-201ENSMUST00000205579 900 ntBASIC14.45□□□□□ -0.1
Scn11aQ9R053 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.45□□□□□ -0.1
Scn11aQ9R053 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Gm13916-201ENSMUST00000117368 628 ntBASIC14.44□□□□□ -0.1
Scn11aQ9R053 Gm11663-201ENSMUST00000117888 290 ntBASIC14.44□□□□□ -0.1
Scn11aQ9R053 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn11aQ9R053 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms