Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.9□□□□□ -0.19
Cacna1fQ9JIS7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Gm9630-201ENSMUST00000178304 885 ntBASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Gm5451-201ENSMUST00000080545 579 ntBASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Gm2875-201ENSMUST00000211333 360 ntBASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cacna1fQ9JIS7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.88□□□□□ -0.19
Cacna1fQ9JIS7 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms