Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ube4bQ9ES00 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ube4bQ9ES00 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Ube4bQ9ES00 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ube4bQ9ES00 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ube4bQ9ES00 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ube4bQ9ES00 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ube4bQ9ES00 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Ube4bQ9ES00 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.91□□□□□ -0.5
Ube4bQ9ES00 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ube4bQ9ES00 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.91□□□□□ -0.5
Ube4bQ9ES00 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ube4bQ9ES00 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ube4bQ9ES00 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ube4bQ9ES00 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ube4bQ9ES00 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ube4bQ9ES00 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Gm21854-201ENSMUST00000179901 471 ntBASIC11.89□□□□□ -0.51
Ube4bQ9ES00 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.89□□□□□ -0.51
Ube4bQ9ES00 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ube4bQ9ES00 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ube4bQ9ES00 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms