Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Acot6-202ENSMUST00000222921 3622 ntBASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Gm26286-201ENSMUST00000104166 134 ntBASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Gm26013-201ENSMUST00000104404 119 ntBASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Gm25545-201ENSMUST00000122673 323 ntBASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Gm9797-202ENSMUST00000218003 294 ntBASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Gm19009-201ENSMUST00000223072 823 ntBASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Gm25201-201ENSMUST00000083093 170 ntBASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-4Q9EQM3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Gm24231-201ENSMUST00000104315 133 ntBASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Gm13263-201ENSMUST00000121271 838 ntBASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms