Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
U2af1Q9D883 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
U2af1Q9D883 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
U2af1Q9D883 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
U2af1Q9D883 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Gm26361-201ENSMUST00000158868 186 ntBASIC16.28■□□□□ 0.2
U2af1Q9D883 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC16.28■□□□□ 0.2
U2af1Q9D883 Rprl1-202ENSMUST00000198476 238 ntBASIC16.28■□□□□ 0.2
U2af1Q9D883 Gm44262-201ENSMUST00000204969 372 ntBASIC16.28■□□□□ 0.2
U2af1Q9D883 Gm45186-201ENSMUST00000206874 478 ntBASIC16.28■□□□□ 0.2
U2af1Q9D883 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.28■□□□□ 0.2
U2af1Q9D883 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.28■□□□□ 0.2
U2af1Q9D883 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
U2af1Q9D883 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC16.28■□□□□ 0.2
U2af1Q9D883 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC16.28■□□□□ 0.2
U2af1Q9D883 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
U2af1Q9D883 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
U2af1Q9D883 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
U2af1Q9D883 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
U2af1Q9D883 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC16.27■□□□□ 0.2
U2af1Q9D883 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
U2af1Q9D883 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
U2af1Q9D883 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
U2af1Q9D883 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
U2af1Q9D883 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
U2af1Q9D883 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
U2af1Q9D883 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
U2af1Q9D883 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.27■□□□□ 0.2
U2af1Q9D883 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
U2af1Q9D883 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
U2af1Q9D883 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC16.27■□□□□ 0.2
U2af1Q9D883 Gm9630-201ENSMUST00000178304 885 ntBASIC16.27■□□□□ 0.2
U2af1Q9D883 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC16.27■□□□□ 0.2
U2af1Q9D883 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.27■□□□□ 0.2
U2af1Q9D883 Gm19994-201ENSMUST00000217086 586 ntBASIC16.27■□□□□ 0.2
U2af1Q9D883 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
U2af1Q9D883 Mir433-201ENSMUST00000093564 124 ntBASIC16.27■□□□□ 0.2
U2af1Q9D883 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC16.27■□□□□ 0.19
U2af1Q9D883 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
U2af1Q9D883 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
U2af1Q9D883 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
U2af1Q9D883 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
U2af1Q9D883 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
U2af1Q9D883 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
U2af1Q9D883 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
U2af1Q9D883 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
U2af1Q9D883 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC16.26■□□□□ 0.19
U2af1Q9D883 Gm27196-201ENSMUST00000184787 2582 ntBASIC16.26■□□□□ 0.19
U2af1Q9D883 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC16.26■□□□□ 0.19
U2af1Q9D883 Gm14130-201ENSMUST00000118417 987 ntBASIC16.26■□□□□ 0.19
U2af1Q9D883 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC16.26■□□□□ 0.19
U2af1Q9D883 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC16.26■□□□□ 0.19
U2af1Q9D883 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
U2af1Q9D883 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.26■□□□□ 0.19
U2af1Q9D883 Gm29199-201ENSMUST00000187766 775 ntBASIC16.26■□□□□ 0.19
U2af1Q9D883 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.26■□□□□ 0.19
U2af1Q9D883 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.26■□□□□ 0.19
U2af1Q9D883 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
U2af1Q9D883 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
U2af1Q9D883 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
U2af1Q9D883 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
U2af1Q9D883 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC16.25■□□□□ 0.19
U2af1Q9D883 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms