Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Gm38092-201ENSMUST00000195600 653 ntBASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Gm4768-201ENSMUST00000206199 686 ntBASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Snf8Q9CZ28 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.75□□□□□ -0.37
Snf8Q9CZ28 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Gm19163-201ENSMUST00000223313 780 ntBASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Snf8Q9CZ28 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.75□□□□□ -0.37
Snf8Q9CZ28 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Gm12363-201ENSMUST00000122250 668 ntBASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Gm9794-201ENSMUST00000202370 423 ntBASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snf8Q9CZ28 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 120.3 ms