Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssr1Q9CY50 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ssr1Q9CY50 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.53□□□□□ -0.24
Ssr1Q9CY50 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssr1Q9CY50 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ssr1Q9CY50 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ssr1Q9CY50 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ssr1Q9CY50 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ssr1Q9CY50 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ssr1Q9CY50 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ssr1Q9CY50 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ssr1Q9CY50 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.52□□□□□ -0.24
Ssr1Q9CY50 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC13.52□□□□□ -0.24
Ssr1Q9CY50 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Gm12291-201ENSMUST00000121627 311 ntBASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Gm12138-201ENSMUST00000122180 951 ntBASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Gm17208-201ENSMUST00000168388 535 ntBASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.52□□□□□ -0.25
Ssr1Q9CY50 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssr1Q9CY50 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Gm8213-201ENSMUST00000118191 441 ntBASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Gm12203-201ENSMUST00000118235 598 ntBASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Gm11803-201ENSMUST00000119966 444 ntBASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Gm12209-201ENSMUST00000120089 596 ntBASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssr1Q9CY50 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms