Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2a1Q99PM3 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2a1Q99PM3 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2a1Q99PM3 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2a1Q99PM3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Gm15953-201ENSMUST00000117656 1732 ntBASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Gm2272-201ENSMUST00000194903 582 ntBASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Gtf2a1Q99PM3 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Cog3-203ENSMUST00000227473 4197 ntBASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 BC001981-202ENSMUST00000191393 1545 ntBASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Gm9035-201ENSMUST00000218318 1697 ntBASIC13.5□□□□□ -0.25
Gtf2a1Q99PM3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gtf2a1Q99PM3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Gtf2a1Q99PM3 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gtf2a1Q99PM3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Gtf2a1Q99PM3 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gtf2a1Q99PM3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gtf2a1Q99PM3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms