Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Gm23596-201ENSMUST00000104304 132 ntBASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Gm15573-201ENSMUST00000119487 540 ntBASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Gm45398-201ENSMUST00000210561 165 ntBASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx6-1Q99MA9 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Gm24891-201ENSMUST00000104391 136 ntBASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Gm25072-201ENSMUST00000175233 235 ntBASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Gm25951-201ENSMUST00000175330 64 ntBASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Gm34023-201ENSMUST00000195539 217 ntBASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Gm9463-201ENSMUST00000206707 601 ntBASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms