Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Gm25927-201ENSMUST00000175058 117 ntBASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Gm27390-201ENSMUST00000184516 176 ntBASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Gm18584-201ENSMUST00000203098 964 ntBASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.99□□□□□ -0.49
Cstf3Q99LI7 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Gm24136-201ENSMUST00000083374 165 ntBASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cstf3Q99LI7 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.98□□□□□ -0.49
Cstf3Q99LI7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Gm8018-201ENSMUST00000173536 789 ntBASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Gm40466-201ENSMUST00000212174 422 ntBASIC11.98□□□□□ -0.49
Cstf3Q99LI7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cstf3Q99LI7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms