Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC15.25■□□□□ 0.03
RtcbQ99LF4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RtcbQ99LF4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Gm16071-201ENSMUST00000119589 793 ntBASIC15.24■□□□□ 0.03
RtcbQ99LF4 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.24■□□□□ 0.03
RtcbQ99LF4 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Gm17826-201ENSMUST00000189720 798 ntBASIC15.24■□□□□ 0.03
RtcbQ99LF4 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC15.24■□□□□ 0.03
RtcbQ99LF4 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.24■□□□□ 0.03
RtcbQ99LF4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RtcbQ99LF4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.23■□□□□ 0.03
RtcbQ99LF4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Gm14760-201ENSMUST00000121831 999 ntBASIC15.23■□□□□ 0.03
RtcbQ99LF4 Gm4879-201ENSMUST00000122190 1272 ntBASIC15.23■□□□□ 0.03
RtcbQ99LF4 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Mir8115-201ENSMUST00000184992 119 ntBASIC15.23■□□□□ 0.03
RtcbQ99LF4 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Gm43520-201ENSMUST00000197996 164 ntBASIC15.23■□□□□ 0.03
RtcbQ99LF4 Gm43186-201ENSMUST00000198130 824 ntBASIC15.23■□□□□ 0.03
RtcbQ99LF4 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.23■□□□□ 0.03
RtcbQ99LF4 AC154532.1-201ENSMUST00000227860 965 ntBASIC15.23■□□□□ 0.03
RtcbQ99LF4 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Acot6-202ENSMUST00000222921 3622 ntBASIC15.23■□□□□ 0.03
RtcbQ99LF4 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RtcbQ99LF4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RtcbQ99LF4 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Gm22442-201ENSMUST00000157256 144 ntBASIC15.22■□□□□ 0.03
RtcbQ99LF4 Gm44329-201ENSMUST00000197469 112 ntBASIC15.22■□□□□ 0.03
RtcbQ99LF4 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RtcbQ99LF4 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms