Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Gm9083-201ENSMUST00000120423 819 ntBASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Gm29199-201ENSMUST00000187766 775 ntBASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Gzmn-202ENSMUST00000225535 989 ntBASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lysmd3Q99LE3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Gm23119-201ENSMUST00000158610 140 ntBASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Gm25700-201ENSMUST00000177693 110 ntBASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Mir433-201ENSMUST00000093564 124 ntBASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd3Q99LE3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd3Q99LE3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd3Q99LE3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.86□□□□□ -0.35
Lysmd3Q99LE3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd3Q99LE3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.86□□□□□ -0.35
Lysmd3Q99LE3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd3Q99LE3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Lysmd3Q99LE3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd3Q99LE3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms