Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb1Q91Y08 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb1Q91Y08 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb1Q91Y08 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.88□□□□□ -0.35
Pcdhb1Q91Y08 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.88□□□□□ -0.35
Pcdhb1Q91Y08 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb1Q91Y08 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb1Q91Y08 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb1Q91Y08 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdhb1Q91Y08 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb1Q91Y08 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb1Q91Y08 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.88□□□□□ -0.35
Pcdhb1Q91Y08 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb1Q91Y08 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Gm4034-201ENSMUST00000187674 480 ntBASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Gm45880-201ENSMUST00000213041 853 ntBASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Matn2-203ENSMUST00000226766 3252 ntBASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb1Q91Y08 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm12957-201ENSMUST00000117835 377 ntBASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm11793-201ENSMUST00000120433 981 ntBASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm8062-201ENSMUST00000139696 444 ntBASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm2546-201ENSMUST00000182630 991 ntBASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm42937-201ENSMUST00000197360 752 ntBASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms