Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Gm6546-201ENSMUST00000192096 766 ntBASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Gm35638-201ENSMUST00000220724 652 ntBASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb13Q91Y06 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
Pcdhb13Q91Y06 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhb13Q91Y06 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb13Q91Y06 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb13Q91Y06 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb13Q91Y06 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb13Q91Y06 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb13Q91Y06 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb13Q91Y06 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb13Q91Y06 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb13Q91Y06 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Pcdhb13Q91Y06 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Gm13736-201ENSMUST00000119272 253 ntBASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Gm27514-201ENSMUST00000183692 110 ntBASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Gm18304-201ENSMUST00000189162 546 ntBASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Gm6007-201ENSMUST00000208170 823 ntBASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb13Q91Y06 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Gm43339-201ENSMUST00000200032 1606 ntBASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Gm12314-201ENSMUST00000118104 538 ntBASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdhb13Q91Y06 Gm27390-201ENSMUST00000184516 176 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms