Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gm28911-201ENSMUST00000188837 117 ntBASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gm28180-201ENSMUST00000189608 722 ntBASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gm18307-201ENSMUST00000206864 949 ntBASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gm7441-201ENSMUST00000220697 1074 ntBASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 AC154186.1-201ENSMUST00000227711 1597 ntBASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Gm11524-201ENSMUST00000119349 807 ntBASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb3Q91XZ7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm12485-201ENSMUST00000119641 291 ntBASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm5277-201ENSMUST00000164923 556 ntBASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm10925-201ENSMUST00000189941 678 ntBASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm37073-201ENSMUST00000192469 1222 ntBASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm43058-201ENSMUST00000197645 625 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms