Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Gm12384-201ENSMUST00000119228 919 ntBASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Gm26927-201ENSMUST00000182385 965 ntBASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga11Q91XY8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga11Q91XY8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms